Structural characterization of a GII.4 2004 norovirus variant (TCH05)

Structural Analysis of Histo-Blood Group Antigen Binding Specificity in a Norovirus GII.4 Epidemic Variant: Implications for Epochal Evolution.

Protruding Domain (UNP Residues 221-531)

ESRTKPFTVPILTVEEMTNSRFPIPLEKLFTGPSSAFVVQPQNGRCTTDGALLGTTQLSPVDICTFRGDVTHIAGTQNYT
MNLASQNWNNYDPTEEIPAPLGTPDFVGKIQGVLTQTTRRDGSTRGHKATVSTGSVHFTPKLGSVQFSTDTSNDFETGQN
TRFTPVGVVQDGSTTHQNEPQQWVLPDYSGRDSHNVHLAPAVAPTFPGEQLLFFRSTMPGCSGYPNMNLDCLLPQEWVQH
FYQESAPAQSDVALLRFVNPDTGRVLFECKLHKSGYVTVAHTGQHDLVIPPNGYFRFDSWVNQFYTLAPMG

0.2M Sodium citrate, 0.1M HEPES and 20% Isoproponol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 295.15K

THESE MUTATIONS ARE STRAIN SPECIFIC AS UNP DOES NOT HAVE THE STRAIN SPECIFIC SEQUENCE

VIRAL CAPSID PROTEIN, HBGA, P-domain Norovirus, VIRAL PROTEIN

chain A and (resseq 224:337 or resseq 347:389 or resseq 400:439 or resseq 448:531 )

chain B and (resseq 224:337 or resseq 347:389 or resseq 400:439 or resseq 448:531 )

chain C and (resseq 224:337 or resseq 347:389 or resseq 400:439 or resseq 448:531 )

chain D and (resseq 224:337 or resseq 347:389 or resseq 400:439 or resseq 448:531 )

chain E and (resseq 224:337 or resseq 347:389 or resseq 400:439 or resseq 448:531 )

chain F and (resseq 224:337 or resseq 347:389 or resseq 400:439 or resseq 448:531 )

chain G and (resseq 224:337 or resseq 347:389 or resseq 400:439 or resseq 448:531 )

chain H and (resseq 224:337 or resseq 347:389 or resseq 400:439 or resseq 448:531 )

chain I and (resseq 224:337 or resseq 347:389 or resseq 400:439 or resseq 448:531 )

chain J and (resseq 224:337 or resseq 347:369 or resseq 374:389 or resseq 400:437 or resseq 449:530 )

ESRTKPFSVPILTVEEMTNSRFPIPLEKLFTGPSSAFVVQPQNGRCTTDGVLLGTTQLSPVNICTFRGDVTHIAGTQNYT
MNLASQNWNNYDPTEEIPAPLGTPDFVGKIQGVLTQTTRRDGSTRGHKATVSTGSVHFTPKLGSVQFSTDTSNDFETGQN
TRFTPVGVVQDGSTTHQNEPQQWVLPDYSGRDSHNVHLAPAVAPTFPGEQLLFFRSTMPGCSGYPNMNLDCLLPQEWVQH
FYQESAPAQSDVALLRFVNPDTGRVLFECKLHKSGYVTVAHTGQHDLVIPPNGYFRFDSWVNQFYTLAPMG