{"data_A1CU0":{"chem_comp":{"id":["A1CU0"],"name":["2'-deoxycytidine-5'-(alpha-thio)-triphosphate, Sp isomer"],"type":["non-polymer"],"pdbx_type":["HETAIN"],"formula":["C9 H16 N3 O12 P3 S"],"mon_nstd_parent_comp_id":[null],"pdbx_synonyms":["[[(2~{R},3~{S},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphinothioyl] phosphono hydrogen phosphate, Sp isomer"],"pdbx_formal_charge":[0],"pdbx_initial_date":["2025-09-22"],"pdbx_modified_date":["2026-06-12"],"pdbx_ambiguous_flag":["N"],"pdbx_release_status":["REL"],"pdbx_replaced_by":[null],"pdbx_replaces":[null],"formula_weight":[483.223],"one_letter_code":[null],"three_letter_code":["A1CU0"],"pdbx_model_coordinates_details":[null],"pdbx_model_coordinates_missing_flag":["N"],"pdbx_ideal_coordinates_details":["Corina"],"pdbx_ideal_coordinates_missing_flag":["N"],"pdbx_model_coordinates_db_code":["9Y62"],"pdbx_subcomponent_list":[null],"pdbx_processing_site":["RCSB"],"pdbx_pcm":[null]},"chem_comp_atom":{"comp_id":["A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0"],"atom_id":["O4'","O2","O5'","C2'","C3'","C4'","C1'","N1","C5","C1","C4","N4","C2","N2","C5'","PA","S1","O2A","O3A","PB","O2B","O1B","O3B","PG","O2G","O1G","O3G","O3'","H2'1","H2'2","H3'","H4'","H1'","H6","H5","HN41","HN42","H5'1","H5'2","H12","H13","H14","H15","HO3'"],"alt_atom_id":["O1","O2","O3","C1","C2","C3","C4","N1","C5","C6","C7","N2","C8","N3","C9","P1","S1","O4","O5","P2","O6","O7","O8","P3","O9","O10","O11","O12","H1","H2","H3","H4","H5","H6","H7","H8","H9","H10","H11","H12","H13","H14","H15","H16"],"type_symbol":["O","O","O","C","C","C","C","N","C","C","C","N","C","N","C","P","S","O","O","P","O","O","O","P","O","O","O","O","H","H","H","H","H","H","H","H","H","H","H","H","H","H","H","H"],"charge":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0],"pdbx_align":[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0,0,1,1,1,1,1,0,0,0,0,1,1,1,1,0],"pdbx_aromatic_flag":["N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N"],"pdbx_leaving_atom_flag":["N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N"],"pdbx_stereo_config":["N","N","N","N","S","R","R","N","N","N","N","N","N","N","N","S","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N"],"pdbx_n_terminal_atom_flag":["N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N"],"pdbx_backbone_atom_flag":["N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N"],"pdbx_c_terminal_atom_flag":["N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N"],"model_Cartn_x":[3.426,6.295,3.047,3.948,3.305,2.897,4.322,5.731,6.143,7.487,8.397,7.991,6.669,9.719,3.799,3.504,5.411,2.691,3.464,2.58,1.141,2.495,3.425,2.735,3.769,2.534,1.407,2.169,3.236,4.842,4.067,1.826,4.185,5.414,7.822,10.375,10.042,4.238,4.603,3.27,0.603,4.096,0.725,1.839],"model_Cartn_y":[7.46,7.892,6.11,5.799,5.12,6.247,7.18,7.176,6.777,6.779,7.142,7.521,7.539,7.144,6.006,4.857,4.929,4.813,3.62,2.345,2.566,1.752,1.507,0.343,-0.023,-0.782,0.681,4.34,5.878,5.249,4.512,6.261,7.912,6.459,6.508,7.421,6.868,5,6.757,4.83,2.281,-0.896,0.115,3.958],"model_Cartn_z":[11.249,8.466,14.078,9.659,10.861,11.763,10.189,10.601,11.844,12.168,11.176,9.94,9.642,11.45,12.94,14.879,15.471,16.135,13.923,14.109,14.435,12.727,15.117,15.932,16.945,14.941,16.603,10.579,8.824,9.328,11.371,12.012,9.379,12.575,13.158,10.748,12.355,12.874,12.954,16.888,13.706,16.763,16.26,11.384],"pdbx_model_Cartn_x_ideal":[2.912,4.54,0.17,4.855,3.641,2.419,4.223,5.018,5.652,6.384,6.469,5.835,5.114,7.206,1.305,-1.191,-1.664,-0.964,-2.368,-3.925,-4.765,-4.081,-4.471,-5.735,-7.074,-5.863,-5.521,3.636,5.464,5.451,3.65,2.059,4.141,5.572,6.895,7.669,7.263,1.659,1.023,-0.715,-4.709,-7.061,-6.246,4.412],"pdbx_model_Cartn_y_ideal":[-0.313,0.049,-1.184,-1.63,-2.564,-1.637,-0.249,0.813,1.731,2.708,2.746,1.831,0.879,3.727,-2.025,-1.312,-3.109,-0.694,-0.507,-0.25,-1.587,0.109,0.954,1.947,1.15,2.455,3.184,-3.6,-1.594,-1.958,-2.99,-1.683,-0.081,1.68,3.446,4.395,3.751,-1.903,-3.065,0.24,-1.882,0.789,3.824,-4.175],"pdbx_model_Cartn_z_ideal":[-0.633,1.411,-0.176,-0.954,-0.751,-0.935,-1.236,-0.614,-1.396,-0.809,0.598,1.318,0.727,1.219,0.04,0.676,0.824,2.145,-0.069,0.252,-0.06,1.679,-0.667,-0.574,-0.979,0.81,-1.582,-1.736,-0.051,-1.805,0.252,-1.962,-2.31,-2.472,-1.41,0.69,2.188,1.063,-0.126,2.145,-0.979,-1.876,-1.578,-1.705],"pdbx_component_atom_id":["O4'","O2","O5'","C2'","C3'","C4'","C1'","N1","C5","C1","C4","N4","C2","N2","C5'","PA","S1","O2A","O3A","PB","O2B","O1B","O3B","PG","O2G","O1G","O3G","O3'","H2'1","H2'2","H3'","H4'","H1'","H6","H5","HN41","HN42","H5'1","H5'2","H12","H13","H14","H15","HO3'"],"pdbx_component_comp_id":["A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0"],"pdbx_ordinal":[1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44]},"chem_comp_bond":{"comp_id":["A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0"],"atom_id_1":["O2","C2","C2","C2'","C2'","N4","C1'","C1'","O3'","N1","C3'","C4","C4","O4'","C4'","C5","O1B","C5'","O3A","O3A","O5'","PB","PB","PA","PA","O1G","O3B","PG","PG","C2'","C2'","C3'","C4'","C1'","C5","C1","N2","N2","C5'","C5'","O2B","O2G","O3G","O3'","O2A"],"atom_id_2":["C2","N4","N1","C1'","C3'","C4","N1","O4'","C3'","C5","C4'","N2","C1","C4'","C5'","C1","PB","O5'","PB","PA","PA","O2B","O3B","S1","O2A","PG","PG","O3G","O2G","H2'1","H2'2","H3'","H4'","H1'","H6","H5","HN41","HN42","H5'1","H5'2","H13","H14","H15","HO3'","H12"],"value_order":["DOUB","SING","SING","SING","SING","DOUB","SING","SING","SING","SING","SING","SING","SING","SING","SING","DOUB","DOUB","SING","SING","SING","SING","SING","SING","DOUB","SING","DOUB","SING","SING","SING","SING","SING","SING","SING","SING","SING","SING","SING","SING","SING","SING","SING","SING","SING","SING","SING"],"pdbx_aromatic_flag":["N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N"],"pdbx_stereo_config":["N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N","N"],"pdbx_ordinal":[1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45]},"pdbx_chem_comp_descriptor":{"comp_id":["A1CU0","A1CU0","A1CU0","A1CU0","A1CU0","A1CU0"],"type":["InChI","InChIKey","SMILES_CANONICAL","SMILES","SMILES_CANONICAL","SMILES"],"program":["InChI","InChI","CACTVS","CACTVS","OpenEye OEToolkits","OpenEye OEToolkits"],"program_version":["1.06","1.06","3.385","3.385","3.1.0.0","3.1.0.0"],"descriptor":["InChI=1S/C9H16N3O12P3S/c10-7-1-2-12(9(14)11-7)8-3-5(13)6(22-8)4-21-27(20,28)24-26(18,19)23-25(15,16)17/h1-2,5-6,8,13H,3-4H2,(H,18,19)(H,20,28)(H2,10,11,14)(H2,15,16,17)/t5-,6+,8+,27-/m0/s1","CBYOGVVSAABFCZ-HAHHPWOESA-N","NC1=NC(=O)N(C=C1)[C@H]2C[C@H](O)[C@@H](CO[P@](O)(=S)O[P](O)(=O)O[P](O)(O)=O)O2","NC1=NC(=O)N(C=C1)[CH]2C[CH](O)[CH](CO[P](O)(=S)O[P](O)(=O)O[P](O)(O)=O)O2","C1[C@@H]([C@H](O[C@H]1N2C=CC(=NC2=O)N)CO[P@@](=S)(O)OP(=O)(O)OP(=O)(O)O)O","C1C(C(OC1N2C=CC(=NC2=O)N)COP(=S)(O)OP(=O)(O)OP(=O)(O)O)O"]},"pdbx_chem_comp_identifier":{"comp_id":["A1CU0"],"type":["SYSTEMATIC NAME"],"program":["OpenEye OEToolkits"],"program_version":["3.1.0.0"],"identifier":["[[(2~{R},3~{S},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphinothioyl] phosphono hydrogen phosphate"]},"pdbx_chem_comp_synonyms":{"ordinal":[1],"comp_id":["A1CU0"],"name":["[[(2~{R},3~{S},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphinothioyl] phosphono hydrogen phosphate, Sp isomer"],"provenance":["PDB"],"type":[null]},"pdbx_chem_comp_audit":{"comp_id":["A1CU0","A1CU0"],"action_type":["Create component","Initial release"],"date":["2025-09-22","2026-06-17"],"processing_site":["RCSB","RCSB"]}}}